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T-UCR Microarray Service

 

 Human Transcribed Ultraconserved regions (T-UCRs) are long noncoding RNAs (LncRNAs) that are transcribed from 481 ultraconserved regions (UCRs) in the human genome. The Arraystar Human T-UCR Microarray is engineered for not only the discovery of novel T-UCRs, but also the accurate detection of potential T-UCRs from reliable databases.
 
Microarray
Species
Format
Probe Targets
Probe Number
Arraystar Human T-UCR Array
Human
8 * 60K
UCRs and their extended regions
51,321
Potential T-UCRs (long non-coding RNAs, collected from authoritative databases, which overlap UCRs in sense or antisense direction)
475
RNA transcripts (LncRNAs and mRNAs)  whose transcription units (TUs) overlap UCRs
6,438
UCR- proximal genes
1,853
Housekeeping genes
200
Non-human sequences
600
 
Arraystar provides the T-UCR microarray services, from sample preparation to in-depth data analysis. Our step by step quality controls are designed to ensure you get the most reliable results. All you need to do is to submit your samples and we will complete the entire project for you.
 
Description of Services
Please refer to Sample Submission for details in how to get your project started.
1.       RNA isolation (optional)
2.       RNA QC
3.       cDNA synthesis
4.       Target preparation by labeling with Cy3
5.       Array hybridization, washing, and scanning
6.       Data extraction, analysis and summarization
 
Bioinformatics Analysis
•   Novel transcription regions identified in tiling regions
•   Filtered differentially expressed genes with a user-defined fold-change threshold
•   Correlation analysis of the T-UCRs and the near coding genes
•   Comprehensive annotation

 

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